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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT23_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVMLVRFG FLLLMISFVF LSNNTLGQQQ DDDDDSAVYI VTLKQPPIVH LFEEQELKHK  60
   61 KSKFTPKLRP RNNSRKRHGK SKIPSVVQSH DSFLRKTLKG EKYIKLYSYH YLINGFALFI 120
  121 NSQQAEKLSM RKEVANIVLD YSVRTATTYT PQFMGLPQGA WVKEGGFEIA GEGVIIGFID 180
  181 TGIDPNHPSF NDNDSKRSYP IPKHFSGVCE VTPDFPSGSC NKKLIGARHF AQSAVTRGIF 240
  241 NSSEDYASPF DGDGHGTHTA SVAAGNHGVP VIVSNHNFGY ASGIAPRAFI SVYKALYKSF 300
  301 GGFAADVVAA IDQAAQDGVD ILSLSITPNR KPPGVATFFN PIDMALLSAV KAGIFVVQAA 360
  361 GNTGPAPKTM SSFSPWIFTV GASSHDRVYS NSLTLGNNVT IPGMGFAIPT DSGKMYKMIS 420
  421 AFHALNNSTS VDKDMYVGEC QDYENFDQDR VSGKLLICSY SARFVLGLST IKQALDVAKN 480
  481 LSATGVIFYI DPYVLGFEIN PTPMDMPGII IPSVEDSKTL LKYYNSSIQR DVTTKEIVSF 540
  541 GAVAAIEGGL NANFSNRAPK VMYYSARGPD PEDNSFNDAD VLKPNLVAPG NSIWGAWSSA 600
  601 STDSTEFEGE KFAMMSGTSM AAPHVAGVAA LIKQSYPQFT PSTISSALST TALLNDNKGS 660
  661 PIMAQRTYSN PDQSLYTATP SDMGSGFVNA TAALDPGLVF DTSFEDYISF LCGINGSDTV 720
  721 VFNYTGFRCP ANNTPVSGFD LNLPSITVST LSGTQTFQRS MRNIAGNETY NVGWSPPYGV 780
  781 SMKVSPTQFS IAMGENQVLS VTLTVTKNSS SSSFGRIGLF GNTGHIVNIP VTVIAKIASS 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle