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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT14_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLSLSSIF FVFPLLLCFF SPSSSSSDGL ESYIVHVQRS HKPSLFSSHN NWHVSLLRSL  60
   61 PSSPQPATLL YSYSRAVHGF SARLSPIQTA ALRRHPSVIS VIPDQAREIH TTHTPAFLGF 120
  121 SQNSGLWSNS NYGEDVIVGV LDTGIWPEHP SFSDSGLGPI PSTWKGECEI GPDFPASSCN 180
  181 RKLIGARAFY RGYLTQRNGT KKHAAKESRS PRDTEGHGTH TASTAAGSVV ANASLYQYAR 240
  241 GTATGMASKA RIAAYKICWT GGCYDSDILA AMDQAVADGV HVISLSVGAS GSAPEYHTDS 300
  301 IAIGAFGATR HGIVVSCSAG NSGPNPETAT NIAPWILTVG ASTVDREFAA NAITGDGKVF 360
  361 TGTSLYAGES LPDSQLSLVY SGDCGSRLCY PGKLNSSLVE GKIVLCDRGG NARVEKGSAV 420
  421 KLAGGAGMIL ANTAESGEEL TADSHLVPAT MVGAKAGDQI RDYIKTSDSP TAKISFLGTL 480
  481 IGPSPPSPRV AAFSSRGPNH LTPVILKPDV IAPGVNILAG WTGMVGPTDL DIDPRRVQFN 540
  541 IISGTSMSCP HVSGLAALLR KAHPDWSPAA IKSALVTTAY DVENSGEPIE DLATGKSSNS 600
  601 FIHGAGHVDP NKALNPGLVY DIEVKEYVAF LCAVGYEFPG ILVFLQDPTL YDACETSKLR 660
  661 TAGDLNYPSF SVVFASTGEV VKYKRVVKNV GSNVDAVYEV GVKSPANVEI DVSPSKLAFS 720
  721 KEKSVLEYEV TFKSVVLGGG VGSVPGHEFG SIEWTDGEHV VKSPVAVQWG QGSVQSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle