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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GMAN2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFSSYIGNS RRSSTGGGTG GWGQSLLPTA LSKSKLAINR KPRKRTLVVN FIFANFFVIA  60
   61 LTVSLLFFLL TLFHFGVPGP ISSRFLTSRS NRIVKPRKNI NRRPLNDSNS GAVVDITTKD 120
  121 LYDRIEFLDT DGGPWKQGWR VTYKDDEWEK EKLKIFVVPH SHNDPGWKLT VEEYYQRQSR 180
  181 HILDTIVETL SKDSRRKFIW EEMSYLERWW RDASPNKQEA LTKLVKDGQL EIVGGGWVMN 240
  241 DEANSHYFAI IEQIAEGNMW LNDTIGVIPK NSWAIDPFGY SSTMAYLLRR MGFENMLIQR 300
  301 THYELKKDLA QHKNLEYIWR QSWDAMETTD IFVHMMPFYS YDIPHTCGPE PAICCQFDFA 360
  361 RMRGFKYELC PWGKHPVETT LENVQERALK LLDQYRKKST LYRTNTLLIP LGDDFRYISI 420
  421 DEAEAQFRNY QMLFDHINSN PSLNAEAKFG TLEDYFRTVR EEADRVNYSR PGEVGSGQVV 480
  481 GFPSLSGDFF TYADRQQDYW SGYYVSRPFF KAVDRVLEHT LRGAEIMMSF LLGYCHRIQC 540
  541 EKFPTSFTYK LTAARRNLAL FQHHDGVTGT AKDYVVQDYG TRMHTSLQDL QIFMSKAIEV 600
  601 LLGIRHEKEK SDQSPSFFEA EQMRSKYDAR PVHKPIAARE GNSHTVILFN PSEQTREEVV 660
  661 TVVVNRAEIS VLDSNWTCVP SQISPEVQHD DTKLFTGRHR LYWKASIPAL GLRTYFIANG 720
  721 NVECEKATPS KLKYASEFDP FPCPPPYSCS KLDNDVTEIR NEHQTLVFDV KNGSLRKIVH 780
  781 RNGSETVVGE EIGMYSSPES GAYLFKPDGE AQPIVQPDGH VVTSEGLLVQ EVFSYPKTKW 840
  841 EKSPLSQKTR LYTGGNTLQD QVVEIEYHVE LLGNDFDDRE LIVRYKTDVD NKKVFYSDLN 900
  901 GFQMSRRETY DKIPLQGNYY PMPSLAFIQG SNGQRFSVHS RQSLGVASLK EGWLEIMLDR 960
  961 RLVRDDGRGL GQGVMDNRAM TVVFHLLAES NISQADPASN TNPRNPSLLS HLIGAHLNYP1020
 1021 INTFIAKKPQ DISVRVPQYG SFAPLAKPLP CDLHIVNFKV PRPSKYSQQL EEDKPRFALI1080
 1081 LNRRAWDSAY CHKGRQVNCT SMANEPVNFS DMFKDLAASK VKPTSLNLLQ EDMEILGYDD1140
 1141 QELPRDSSQP REGRVSISPM EIRAYKLELR PHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle