YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RPI3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLSFVSSS HLTLRTPSIA LRSTGSSPRT SVSFSVKAQS VALSQDDLKK LAAEKAVEAI  60
   61 KPGMVLGLGT GSTAAFAVDQ IGKLLSSGEL YDIVGIPTSK RTEEQARSLG IPLVGLDTHP 120
  121 RIDLAIDGAD EVDPNLDLVK GRGGALLREK MVEAVADKFI VVADDTKLVT GLGGSGLAMP 180
  181 VEVVQFCWNF NLIRLQDLFK EFGCESKLRV DGDGKPYVTD NSNYIIDLYF KTPLKDGFAA 240
  241 AKEIGKFQGV VEHGLFLGMA TSVIIAGKNG VEVMTK

Type	Start	End	Confidence
Signal Peptide	1	20	0.68
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	276	0.96