YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3859599, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQISLLLC LLLFIFSISS SLHETEARKH NKYKPAPIMS LVPRTLYDQI FIHKDNNACP  60
   61 AKGFYPYEAF VEATRSFPKF GSVGNFWTRR REVAAFLAQI SHETTGGWAT APDGPYAWGL 120
  121 CFKEEVSPQS NYCDASNKDW PCVSGKSYKG RGPIQLSWNY NYGQAGRALG FDGLQNPELV 180
  181 ANNSVLAFKT ALWFWMTEQT PKPSCHNVMV NRYRPTKADR AANRTVGYGL VTNIINGGLE 240
  241 CGIPGDGRVT DRVGYFQRYA QLFKVTTGPN LDCENQRPFS

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	280	0.99