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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT26_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIGCKVLVF FTCFLTVTAE IYIVTMEGEP IISYKGGDNG FEATAVESDE KIDTTSELVT  60
   61 SYARHLERKH DMLLGMLFVE GSYKKLYSYK HLINGFAAHV SPDQAEMLRR APGVKSVDRD 120
  121 WKVRKLTTHT PQFLGLPTDV WPTGGGYDRA GEDIVIGFID SGIFPHHPSF ASHHTTVPYG 180
  181 PHPSYKGKCE EDPHTKISFC NGKIIGAQHF AEAAKAAGAF NPDIDFASPM DGDGHGSHTA 240
  241 AIAAGNNGIP VRMHGYEFGK ASGMAPRARI AVYKALYRLF GGFVADVVAA IDQAVHDGVD 300
  301 ILSLSVGPNS PPATTKTTFL NPFDATLLGA VKAGVFVAQA AGNGGPFPKT LVSYSPWITT 360
  361 VAAAIDDRRY KNHLTLGNGK MLAGIGLSPS TRPHRSYKMV SANDVLLGSS GMKYNPSDCQ 420
  421 KPEVLNKKLV EGNILLCGYS FNFVAGSASI KKVAETAKHL GAAGFVLVVE NVSPGTKFDP 480
  481 VPSCIPGILI TDVSKSMDLI DYYNVTTSRD WMGRVKDFKA EGSIGDGLEP ILHKSAPEVA 540
  541 LFSARGPNTK DFSFQDADLL KPDILAPGSL IWSAWSANGT DEANYIGEGF ALISGTSMAA 600
  601 PHIAGIAALV KQKHPQWSPA AIKSALMTTS TVIDRAGRPL QAQQYSETET VTLVKATPFD 660
  661 YGSGHVNPSA ALDPGLIFDA GYEDYIGFLC TTPGIDAHEI KNFTNTPCNF KMVHPSNFNT 720
  721 PSIAISHLVR TQTVTRRVTN VAEEEETYTI TSRMEPAIAI EVSPPAMTVR AGASRTFSVT 780
  781 LTVRSVTGAY SFGQVTLKGS RGHKVTLPVV AMGQRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle