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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC7_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVRVPIAC ALILLAISSI TSASIVEHTF NVQNLTVSRL CKRQVITVVN GSLPGPTIRV  60
   61 KEGDSLVIHV LNHSPHNITI HWHGIFHKLT VWADGPSMIT QCPIQPGQRY AYRFNITGQE 120
  121 GTLWWHAHAS FLRATVYGAL VIRPKSGHSY PFPKPHKEVP ILFGEWWNTD VVALEEAAIA 180
  181 TGVPPNNSDA YTINGRPGNL YPCSKDRMFS LNVVKGKRYL LRIINAAMNI QLFFKIANHR 240
  241 LTVVAADAVY TAPYVTDVIV IAPGQTIDAL LFADQSVDTS YYMAAHPYAS APAVPFPNTT 300
  301 TRGVIHYGGA SKTGRSKPVL MPKLPSFFDT LTAYRFYSNL TALVNGPHWV PVPRYVDEEM 360
  361 LVTIGLGLEA CADNTTCPKF SASMSNHSFV LPKKLSILEA VFHDVKGIFT ADFPDQPPVK 420
  421 FDYTNPNVTQ TNPGLLFTQK STSAKILKFN TTVEVVLQNH ALIAAESHPM HLHGFNFHVL 480
  481 AQGFGNYDPS RDRSKLNLVD PQSRNTLAVP VGGWAVIRFT ANNPGAWIFH CHIDVHLPFG 540
  541 LGMIFVVKNG PTKSTTLPPP PPDLPKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle