YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12324543, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTFAPGTRV YHLIIIVFFF FFCLSSFFAS IVMADEYTGE ATGSSEAKVH IIYTEKPTDE  60
   61 EPKTYHLRTL SSALGSEEAA KDALIYSYKE AASGFSAKLT PEQVAEISKQ PGVIQVVPSQ 120
  121 TYQLHKPGGG GGFKLT

Type	Start	End	Confidence
Cytoplasmic	1	9	0.43
Transmembrane Helix	10	34	0.58
Non-Cytoplasmic	35	136	0.78