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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15219405, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFTGFAFV FGILLGILAI VTAEVVGFLY LLKRLNRKRD RQESNSSSDP NFKSFDPRQS  60
   61 IDFSLNKQGV IWILELDENV KDWMKEKLPK EQKKKRVDLL EVHPVRRFAR IKDHKLILSD 120
  121 SLDGPQTPIT LKGCFVDAVS GSGPTRKWAK RFPIQVESKT SVLYKGNRVF YIFLETSWEK 180
  181 ESWCKALRLA ACENQERFIW STKLKEDFRN YLASLNAAYP SFMKPSAGFS FESLDKGLKA 240
  241 DGPSSKVRLI WKKFSKKCST KVNFPPSIRD DKKTSSRSYQ DSQSTGSSGK STSARRMQDN 300
  301 IPEETDVQVI SRSWSHSSHA SDVDSEDKSF DEGTLALNVV LSRLFFDVKQ NTVLKNLVRE 360
  361 RIQRIMSNMR IPSYIGELIC CDVDIGNLPP YIHGTRILPM EMNGVWAFEI DIEYTGGAGL 420
  421 EVETRVDARE EDLQKGIAEG KLQPNSAGDV PPDLLEGLAD FEKQLNVPGG TVDAQDVKSG 480
  481 GTDKADESKG PKGTKTGSSN GSKWKSMLKN IVEQVSQVPI TLSIGVSSLR GTLCVHMKPP 540
  541 PSDQLWFGFT SMPDIEFNLV SSVGEHKITN SHVAMFLVNR FKTAIRDVMV LPNCESVTIP 600
  601 WMTAEKDDWV ERNVAPFMWL NQDSTSDREN LEAAEAKSKA DKPPTSEQMQ KTVNIPQKPR 660
  661 IEEESVSADT APSANSIALL VESDKSLEEL KTPLLESSEK HDTIARGGSA GDIIPGIGQS 720
  721 PSMSTVSGEE DDSNSKGKKM GAAKARMFDF RKKVGEKFEE KKRHVEEKSR QIVEKMRGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle