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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7486978, gi|7...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSRLARFV SEVAPPQFVT VMRRHRAAKQ KLDTIKEEEN KEDSFNGGMV VMMKTSHQHT  60
   61 LLIFRSCRDL AAIVGFRILL FTGFSGFYLV FLAFKFPHFI EMVAMLSGDT GLDGALSDTS 120
  121 LDVSLSGSLR NDMLNRKLED EDHQSGPSTT QKVSPEEKIN GSKQIQPLLF RYGRISGEVM 180
  181 RRRNRTIHMS PFERMADEAW ILGSKAWEDV DKFEVDKINE SASIFEGKVE SCPSQISMNG 240
  241 DDLNKANRIM LLPCGLAAGS SITILGTPQY AHKESVPQRS RLTRSYGMVL VSQFMVELQG 300
  301 LKTGDGEYPP KILHLNPRIK GDWNHRPVIE HNTCYRMQWG VAQRCDGTPS KKDADVLVDG 360
  361 FRRCEKWTQN DIIDMVDSKE SKTTSWFKRF IGREQKPEVT WSFPFAEGKV FVLTLRAGID 420
  421 GFHINVGGRH VSSFPYRPGF TIEDATGLAV TGDVDIHSIH ATSLSTSHPS FSPQKAIEFS 480
  481 SEWKAPPLPG TPFRLFMGVL SATNHFSERM AVRKTWMQHP SIKSSDVVAR FFVALNPRKE 540
  541 VNAMLKKEAE YFGDIVILPF MDRYELVVLK TIAICEFGNV TAPYIMKCDD DTFIRVESIL 600
  601 KQIDGVSPEK SLYMGNLNLR HRPLRTGKWT VTWEEWPEAV YPPYANGPGY IISSNIAKYI 660
  661 VSQNSRHKLR LFKMEDVSMG LWVEQFNASM QPVEYSHSWK FCQYGCTLNY YTAHYQSPSQ 720
  721 MMCLWDNLLK GRPQCCNFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle