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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7630074, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFYISATGI KKVTISNPGV GIGKGSGGCA AAAAALAARR FSSRTLLLLL LLLAIVLPFI  60
   61 FVRFAFLVLE SASVCDSPLD CMGLRLFRGG DTSLKIGEEL TRALVEETTD HQDVNGRGTK 120
  121 GSLESFDDLV KEMTLKRRDI RAFASVTKKM MERKVQSAKH HELVYWHLAS HGIPKSLHCL 180
  181 SLRLTEEYSV NAMARMRLPP PESVSRLTDP SFHHIVLLTD NVLAASVVIS STVQNAVNPE 240
  241 KFVFHIVTDK KTYTPMHAWF AINSASSPVV EVKGLHQYDW PQEVNFKVRE MLDIHRLIWR 300
  301 RHYQNLKDSD FSFVEGTHEQ SLQALNPSCL ALLNHLRIYI PKLFPDLNKI VLLDDDVVVQ 360
  361 SDLSSLWETD LNGKVVGAVV DSWCGDNCCP GRKYKDYFNF SHPLISSNLV QEDCAWLSGM 420
  421 NVFDLKAWRQ TNITEAYSTW LRLSVRSGLQ LWQPGALPPT LLAFKGLTQS LEPSWHVAGL 480
  481 GSRSVKSPQE ILKSASVLHF SGPAKPWLEI SNPEVRSLWY RYVNSSDIFV RKCKIMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle