YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6730725, gi\|3...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHLARPKQ RLHSNPSLIH LFSTSSSSSS SSPQDGNESN EQPSQSSSDY KISSYFSGIR  60
   61 SSLKQTQSQD GKRQFVRFDA KPQNSLSGNQ DIRRNLNEFR SRATAPPPRD MQDLFKQNVL 120
  121 SKSGGTRRIE GVPLTNIKAN LRQMRPQQAT TESKWANLSG IQNIMKTNIN DNIRSNVIGG 180
  181 AAEGLPHSVV GKELEEEDVT EEEMKSEFIK SYDPIELGEK LRLYRPEGKK EEGWFSLQEL 240
  241 NQRLVKLRAM EEEQFQKTSI VHPSFVNNLR SEFHKFTKAQ KSDPFQNTNI WGVLSGTPKY 300
  301 MLEPPKDQLV ETYFHPDNMS SAEKMKIELA KVREEFKMSE SDCGSARVQV AQLTTKIKHL 360
  361 SSVLHKKDKH SRKGLIAMVQ RRKKLLKYMR RTDWDSYCLS LSKLGLRDNP DYKF

Type	Start	End	Confidence
Signal Peptide	1	31	0.95
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	414	0.99