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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7572930, gi|1...
Protein type: Transmembrane
Type Confidence: 0.51
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIQERLSV SSSSSSSSSS LSLSTALPKG DSLPIDADSW MIAEERAHEI LCTIQPALVS  60
   61 DRSRNEIIDY VRTLIMSHEG IEVFSFGSVP LKTYLPDGDI DLTVLTKQNM DDDFYGQLCS 120
  121 RLQNEERESE FHATDVQFIP AQVKVIKCNI RNIAVDISFN QTAGLCALCF LEQVLSAIQN 180
  181 QAPEVDQLFG RDHLFKRSII LVKAWCYYES RILGANTGLI STYALAVLVL YIINLFHSSL 240
  241 SGPLAVLYKF LDYYGSFDWN NYCISVNGPV PISSLPELTA ASPENGHELL LDEKFLRNCV 300
  301 ELYSAPTKAV DSNGLEFPIK HLNIVDPLKY SNNLGKSVTQ GNVQRIRHAF TLGARKLRDV 360
  361 LSLPGDTMGW RLEKFFRNSL ERNGKGQRQD VNDPVTAFGT GRSELSELSG DFDSSFGRLV 420
  421 YGQMYHGHSL PGTFQHGYIP VSSHLSGWDI VRHLVTYRKN EFHLRSLNVS TSMQPFPLHS 480
  481 LPNGCQNMRK TRGTGTYIPD MSQQVYSDRF RESGTGTSST NHLEASSEAI DNDGASSCCN 540
  541 LSGEVSTSCT SNKGEECVRP ESVLKSQRSA NLELDDNCQF PPPENLVEPR TSSTLVLENG 600
  601 KEESIRSSQT MNGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle