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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C78A9_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR  60
   61 RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA ERLMAFSLGE TRVIVTCNPD 120
  121 VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET 180
  181 QRSVIANQIV KCLTKQSNTK GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE 240
  241 LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS 300
  301 DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL 360
  361 DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW ARLAITDTII DGRRVPAGTT 420
  421 AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG 480
  481 LTTVTFWTAT LLHEFEWLTP SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle