YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dsl-6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIIKYTVL TLFYAQLINC SGYLEVHLRS PHEQPATVNI STDVQNEESN VFEVILKPNV  60
   61 VFNVTRIPVD FNKTYNLIIK SEANDGKSKM TMESNLTPRV GLISPIQVTR TFDGLRIIIE 120
  121 CDENWFGEKC DVFCDNIEQR LHGKRCNYRG VPSCLNMFTG AGCMKMITPM DCSCKNNGKC 180
  181 VDSAETPICE CTRGFKGDTC EEMHETIKAA INVQQEEIGC GGSIHNSIME NLVLNQMREV 240
  241 KQDTMFQLLR SLVGAIFGAI SSVLPIDGTL GNAACNNSLV DSVSELDGSG VFPEEGSGIT 300
  301 FLD

Type	Start	End	Confidence
Signal Peptide	1	20	0.46
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	303	0.87