YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36707
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYINFFQVSL ALSVLVDVVL CAALLVSLIY YFYTGKSFSP HYIVGFCSFF ILFSGFFISL  60
   61 LVAVHTKDIR AILVSVVFTV ARFICAIIVV IAWLSDYHGN PTEDTPKSKS EQENVTEDPY 120
  121 EWISHRKAIL IAFAGIYIKI FISQLFILNR YYSHAADTQR EAKQREIDME F

Type	Start	End	Confidence
Cytoplasmic	1	9	0.90
Transmembrane Helix	10	33	0.91
Non-Cytoplasmic	34	40	0.87
Transmembrane Helix	41	64	0.92
Cytoplasmic	65	71	0.87
Transmembrane Helix	72	94	0.93
Non-Cytoplasmic	95	127	0.95
Transmembrane Helix	128	148	0.88
Cytoplasmic	149	171	0.90