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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lev-10
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLIYLFLLS IFVSKADGNS RKTIFQCDQH FDESQPEGVI EFPSLPKQLA LSHGVNNSKP  60
   61 EQQYNLQCVY TFVAGSRQRV RLEFDHFLLS GSSENCDIEY VDIYSEVESV DEDILSSALG 120
  121 GRYCGTVAPH VRISLRRVMK LVLHSRSTNH EDNHGFRAKY SFIPEDKFIA GEPVGGKKCS 180
  181 FIIDSSDRKI GTLYSPTYPG TYPHNMHCSY LMKAGRGERI RLFFTDFDIF FGGEHCPYDS 240
  241 VTIFDGPTPA SPIIRKVCGL QQRMEVYSMG NSLLIHFNTT HPAKSDPRGF IMDYEFSTRF 300
  301 VNIDKLLNKQ RGVTHIRGTE CDVRVESNRE TFHTISSPNY PEVYPANTTC TYIIHGLQGE 360
  361 QNLEKVILTF DSIAVLSFDT SPATAPPSAD IDDIACPSAW VGIAIGEGNM KAVMSSTDDS 420
  421 TFDVTLCERI PPNSPLLGPY ISEGPRMVMQ FGSTETRDDN ISPIGFKATI EFKTDFGVTG 480
  481 ESLGTSNECK FRFTSSTGFF NSPRYPANYP LDTNCTYYIV GQPGKEILLH FEQFALSGNT 540
  541 DNNCNDYLDV YDVFVKNGKE ELRRKERYCA DTFPGPSVSA FGSHEMRVVF TSGSSGTANG 600
  601 FKALFEIRTA RKEDVPRGEA HIRRGAYRCG SVINSTSEKP NGLIISPNYP VKYNKDVHCD 660
  661 WQINVKEGYQ VLLKMEAIDV EGEMTSNGAS CQKAVIRVDG GPRSEYCGTK REFFEAYLSP 720
  721 SNSVRISFLT APDKVNGLKG FNLSWTEVKN LSGKDENVCK SDSLYLCTYS KLCIDAKLRC 780
  781 NGLDNCGYGV QDDTDEQHCQ NYSPRTFYTA KFMATSSSAT VALTILIIVM LVLPAILCAH 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle