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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cpt-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEARSAAAL SFAVTHDGVS VSYDQELLRD IWHGISRSYK RRTGRFRNDF MNGMFPANSW  60
   61 TLGLVVGAVA VFSVIKHDLS FGIFPFIQNY IVHYIFGDGY LGQSISIAVA GALLWLIFVQ 120
  121 LLRLSIKTLL EYKGWMYESP GKPVSKATKL WLGVLHIISK AGPMLHSFQG ALPRLPLPNL 180
  181 DDTVRKHLLS MKPILSDEEF QELEFLSERF RKGVGRRLQR YLTLKSWFSS NYVTDWWEEF 240
  241 VYMRQRSPIM INSNYYGFDT LNEHPTQNQA SRAANLTYTS LQFRRMVDRQ EVSPFSISPR 300
  301 TKVPFCTMQY ERLFNTCRVP GEEVDRLLHW DDAKHIAVYC RGVWFKLIVH NGKRLLEACE 360
  361 LQVQYDAILA HTHEPSEGEM HLASLTAGER ADWAKTRRAH FRSGVNKTSL NDIERAAFVV 420
  421 ILDDEETHYD PQDPSKLDHW AHNLLHGKAH DRWFDKSFNL IISKNGHVGI NTEHSWGDAA 480
  481 VMAHFTEWSL LQDIVFIGYD ENGRCKGEPK EKLTPERLKW EIPAPALDQI RKSMEVANAL 540
  541 IADVEMSLLV WTDYGKGFAK KLKVSPDAFL QMTLQYTYFK NQNKFSLTYE ASMTRLFREG 600
  601 RTETVRSCTV QSSDFVRSML DASKTPQDRL QLLRKACDKH QELYRDAMCG QGVDRHLFAL 660
  661 YVIKRYLEEE SPFFDNIFPP TYLLSTSQTP MNQCEADAKG LSNEVRLRLI TAGGGFGPVA 720
  721 DRGYGVSYIV AGEDTLSFHI SSKRSADNTS SREFREELKR SLNDMKKLAE AIEAPKKKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle