YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	209L2_MACMU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSKEPRAQ PLGLLEEEEL ITSSMNFFPR DFGFRQTRGY KSLAGCLGHA PLVLPLLFFT  60
   61 LFTGLLVAIL VQVSKNPSSQ RLDQSKQDEI SQDLSQLKAA VERLCRPCPW EWTFFQGNCY 120
  121 FISNSQRNWH DSITACQEVG AQLVVIKSAE EQNFLQLQSS RSNRFAWMGL SDLNQEDMWQ 180
  181 WVDDSPLSTS FKQYWNRGEP NNIGEEDCVE FNGNGWNDDK CSAAKFWICK KSAASCSRDE 240
  241 GQLLSSASAS PIAHAA

Type	Start	End	Confidence
Cytoplasmic	1	46	0.90
Transmembrane Helix	47	71	0.88
Non-Cytoplasmic	72	256	0.93