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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CASP_MESAU
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSSEAWCI VLFSVFASFS AEPTMHGEIL SPNYPQAYPN EMEKTWDIEV PEGFGVRLYF  60
   61 THLDMELSEN CEYDSVQIIS GGVEEGRLCG QRTSKNANSP IVEEFQIPYN KLQVIFRSDF 120
  121 SNEERFTGFA AYYAAIDVNE CTDFTDVPCS HFCNNFIGGY FCSCPPEYFL HDDMRNCGVN 180
  181 CSGNVFTALI GEISSPNYPN PYPENSRCEY QILLEEGFQV VVTIQREDFD VEPADSQGNC 240
  241 QDSLLFAAKN RQFGPFCGNG FPGPLTIETH SNTLDIVFQT DLTEQKKGWK LRYHGDPIPC 300
  301 PKEITANSVW APEKAKYVFK DVVKISCVDG FEAVEGNVGS TFFYSTCQSN GQWSNSRLRC 360
  361 QPVDCGIPEP IQNGKVDDPE NTLFGSVIHY SCEEPYYYME HAEHGGEYRC AANGSWVNDE 420
  421 LGIELPKCVP VCGVPTEPFR IQQRIFGGFP AKIQSFPWQV FFEFPRAGGA LIGEHWVLTA 480
  481 AHVVEGNSDP SMYVGSTSVR MENLANVQKL TTDRVIIHPG WKPGDDLSTR TNFDNDIALV 540
  541 RLKDPVKMGP TVSPICLPGT SSEYEPSEGD LGLISGWGRT ERRNIVIQLR GAKLPVTSLE 600
  601 KCRQVKEENP KARADDYVFT SNMICAGEKG VDSCQGDSGG AFALPVPNVR DPKFYVAGLV 660
  661 SWGKKCGTYG IYTKVKNYKD WILQTMQENS VPSQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle