YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLS1_STAES
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFGFLGTIL TILLVVGFIT NVVLAFVIIF LERDRRTASS TWAWLFVLFV LPVIGFILYL  60
   61 FLGRTVSKKK MEKNNGDELN AFEDLVQDQI DSFDKHNYGY INDQVIKHRD LIRMLLMKQD 120
  121 AFLTENNKID LFTDGHKLYE KVLEDIYNAQ DYIHLEYYTF ELDGLGKRIL DALETKLKEG 180
  181 LEVKLLYDDV GSKKVRLSKF KHFRALGGEV EAFFPSKVPL INFRMNNRNH RKIIIIDGQI 240
  241 GYVGGFNVGD DYLGLGKLGY WRDTHTRVQG EGIDALQLRF ILDWNSQSHR PQFKFDQKYF 300
  301 PKKIGDKGNA AIQIASSGPA FDLHQIEYGY TKMIMSAKKS IYLQSPYFIP DQSYINALKM 360
  361 AANSGVEVNL MIPCKPDHPF VYWATFSNAA DLLDSGVNIY TYQNGFIHSK ILMIDDEISS 420
  421 IGSANMDFRS FELNFEVNAF IYDEDIAKQL RQAFEKDIEQ SKLLTKEVYD KRPLSIKFKE 480
  481 GLAKLISPIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.80
Transmembrane Helix	8	31	0.93
Cytoplasmic	32	40	0.84
Transmembrane Helix	41	62	0.94
Non-Cytoplasmic	63	490	0.90