YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COXZ_RHILO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKPAGKNS NRIVAAVCLA FFTGMIGMAY AAVPLYKMFC QATGYGGTTQ RVEKQYAGRV  60
   61 LDREITVRFD ANIAGVPWEF QPVQRSMTMK IGETVQAHYQ ATNKFDRPVT GRATFNVQPE 120
  121 LAGPYFNKVE CFCFTDTSLK PGETVDMPVL FYVDPDIVNV PELKDVKTIT LSYTMFPVEK 180
  181 NKPVASSEPV QGTSKIISDT EANLGG

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	206	0.99