YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COXZ_RHIME
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNGQADRK ERSNGVIVGT CLAFVAGMIG MAYAAVPLYD MFCRVTGYNG TTQRVEQASD  60
   61 LILDEKIKVT FDANVAAGLP WEFVPVQRDI DVRIGETVQI MYRAKNLAST PTTGQATFNV 120
  121 TPMAAGAYFN KVQCFCFTET TLEPGEEMEM PVVFFVDPEI VKPVETQGIK TLTLSYTFYP 180
  181 REPSKPVAQV KAKAENKL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.87
Transmembrane Helix	15	36	0.89
Non-Cytoplasmic	37	198	0.95