YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRAM_TRYBB
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNEAGPIFE ESNAEVGTPP ADAVHDDFFF DYKNATGYAD DCNITGDCNE TDDCDITGDC  60
   61 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCDITGDC 120
  121 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCDITGDCNE TDDCNITGDC 180
  181 NETDDCDITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCNITGDC 240
  241 NETDDCNITG DCNETDDCNI TGDCNETDDC DITGDCNETD DCNITGDCNE TDDCNITGDC 300
  301 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCDITGDC 360
  361 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCNITGDC 420
  421 NETDDCDITG DCNETDDCNI TGDCNETDDC DITGDCNETD DCNITGDCNE TDDCNITGDC 480
  481 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCDITGDC 540
  541 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCNITGDC 600
  601 NETDDCDITG DCNETDDCNI TGDCNETDDC DITGDCNETD DCNITGDCNE TDDCNITGDC 660
  661 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCDITGDC 720
  721 NETDDCNITG DCNETDDCNI TGDCNETDDC NITGDCNETD DCNITGDCNE TDDCNITGDC 780
  781 NETDDCDITG DCNETDDCNI TGDCNETDDC DITGDCNETD DCNITGDCNE TEVSDAADGT 840
  841 DGMFLKSSSS LKLVALCDGC PTEDSPKSSN AKGKGSSVSA GLLLLAGSTF LVLAVGLSAV 900
  901 LFLGRERQNA VVICDNEVMM EEVPGCLSDA SFAVPVTQSS DEARP

Type	Start	End	Confidence
Non-Cytoplasmic	1	879	0.99
Transmembrane Helix	880	903	0.87
Cytoplasmic	904	945	0.95