YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB1_BACC1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLIYIIVG IAGILGALSR YYLGLTIHEF WHHTFPLATL LINLVGCFLL AWLTTYIAQR  60
   61 NILPAEIITG IGTGFIGSFT TFSTFSVETI QLINHSEWSI AFLYVSCSIL GGLIMSGLGY 120
  121 TLGDFLIKKH LTEGDHL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.91
Transmembrane Helix	5	24	0.94
Non-Cytoplasmic	25	33	0.77
Transmembrane Helix	34	56	0.90
Cytoplasmic	57	66	0.73
Transmembrane Helix	67	85	0.92
Non-Cytoplasmic	86	99	0.80
Transmembrane Helix	100	122	0.94
Cytoplasmic	123	137	0.94