YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB_OCEIH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNVLIVMLG GFIGANLRYW LGEWMSSSSG FPTGTFVINA IGCFLLGWLL TYSEKNRLLS  60
   61 KEWSLLLGTG LIGSFTTFST FSVETLLLIE SAKYIVASLY VFGSIFLGIG LAYIGVRLAL 120
  121 YCKKEEDIA

Type	Start	End	Confidence
Cytoplasmic	1	4	0.71
Transmembrane Helix	5	22	0.83
Non-Cytoplasmic	23	29	0.88
Transmembrane Helix	30	52	0.91
Cytoplasmic	53	62	0.94
Transmembrane Helix	63	83	0.92
Non-Cytoplasmic	84	95	0.71
Transmembrane Helix	96	116	0.92
Cytoplasmic	117	129	0.84