YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB_PYRHO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAKIIALLI IGGGLGALTR YYISGVLPVY KDFPIGTLIV NSLASFLLGY IYGLLFSGFD  60
   61 ISPEWRIFLG TGFCGGLSTF STFSYETFSL LREGEIWLAF ANITTNILVT IFLVFLGFIL 120
  121 ARR

Type	Start	End	Confidence
Cytoplasmic	1	4	0.92
Transmembrane Helix	5	24	0.91
Non-Cytoplasmic	25	34	0.75
Transmembrane Helix	35	56	0.93
Cytoplasmic	57	66	0.77
Transmembrane Helix	67	85	0.95
Non-Cytoplasmic	86	96	0.77
Transmembrane Helix	97	120	0.92
Cytoplasmic	121	123	0.83