YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DXR_PASMU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISYFMKKI VILGSTGSIG TSTLSVITHN PDKYQVFALV GGRNVELMFQ QCLTFQPSFA  60
   61 ALDDDVAAKM LAEKLKAHQS QTTVLAGQQA ICELAAHPEA DMVMAAIVGA AGLLPTLSAV 120
  121 KAGKRVLLAN KEALVTCGQL FIDAVRESQA QLLPVDSEHN AIFQSLPPEA QRQIGFCPLS 180
  181 ELGISKIVLT GSGGPFRYTP LEQFEQITPA QAVAHPNWSM GKKISVDSAT MMNKGLEYIE 240
  241 ARWLFNASAE EMEVIIHPQS IIHSMVRYID GSVIAQMGNP DMRTPIAETM AYPSRTVAGV 300
  301 EPLDFYQLNG LTFIEPDYQR YPCLKLAIDA FSAGQYATTA MNAANEIAVA SFLDNKIKFT 360
  361 DIARLNQLVV SKLQPQKIHC IEDVLEVDKK ARELSQSIIL SFSHP

Type	Start	End	Confidence
Signal Peptide	1	25	0.52
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	405	0.91