YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENTP1_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDRRESELK VFCSKNILSI LGFSCIIAVI ALLALGLTQN KALPENVKFG IVLDAGSSHT  60
   61 SLYIYRWPAE KENDTGVVTQ IEESNVKGPG ISGFAKKVNE INVYLTACME RAQKVIPSIQ 120
  121 HMETPVYLGA TAGMRLLRME NKQMADKILA AVASSISEYP FDFQGARIIS GQEEGAYGWI 180
  181 TVNYLLGKFT QKLSWFNLKP SKDDTQETYG ALDLGGASTQ ITFVPQNETT ESPNNNLYFR 240
  241 LYGKNYSVYT HSFLCYGKDQ ALLQKLALGL QGTNGIIHEP CFHSRYMRKI KMSVLNEGFC 300
  301 TKRHELNSSF YPLVDIEIRG AGNFQRCRQS IIQLFNTSYC PYSSCSFNGV FLPPLHGQFG 360
  361 AFSAFYYVME FLNLTSEESV SVEQLTEKLE EFCAQRWEEV QKNFGEVKEK YLSEYCFSGT 420
  421 YILVLLLNGY HFTAESWKNI HFMNKVRSTD VGWTLGYMLN LTNKIPAEEP MSPPLPHSTY 480
  481 VFLMVLFSLI LLAVIIVGIV VFHKPSYFWK DMV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.86
Transmembrane Helix	17	37	0.93
Non-Cytoplasmic	38	479	0.89
Transmembrane Helix	480	502	0.96
Cytoplasmic	503	513	0.85