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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|327819
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKGIRKNY QHLWKGGILL LGTLMICSAV EKLWVTVYYG VPVWKETTTT LFCASDAKAY  60
   61 DTEVHNVWAT HACVPTDPNP QEVVLENVTE DFNMWKNNMV EQMQEDVINL WDQSLKPCVK 120
  121 LTPLCVTLNC KDVNATNTTS SSEGMMERGE IKNCSFNITK SIRDKVQKEY ALFYKLDVVP 180
  181 IDNKNNTKYR LISCNTSVIT QACPKVSFEP IPIHYCAPAG FAILKCNNKT FNGKGQCKNV 240
  241 STVQCTHGIR PVVSTQLLLN GSLAEEKVVI RSDNFTDNAK TIIVQLNESV KINCTRPSNN 300
  301 TRKSIHIGPG RAFYTTGEII GDIRQAHCNI SRAQWNNTLK QIVEKLREQF NNKTIVFTHS 360
  361 SGGDPEIVMH SFNCGGEFFY CNSTQLFNST WNDTEKSSGT EGNDTIILPC RIKQIINMWQ 420
  421 EVGKAMYAPP IKGQIRCSSN ITGLLLTRDG GKNESEIEIF RPGGGDMRDN WRSELYKYKV 480
  481 VKIEPLGVAP TKAKRRVVQR EKRAVGIGAL FLGFLGAAGS TMGARSMTLT VQARQLLSGI 540
  541 VQQQNNLLRA IEAQQHMLQL TVWGIKQLQA RVLAVERYLK DQQLMGIWGC SGKLICTTAV 600
  601 PWNTSWSNKS LDSIWNNMTW MEWEKEIENY TNTIYTLIEE SQIQQEKNEQ ELLELDKWAS 660
  661 LWNWFGITKW LWYIKIFIMI VGGLIGLRIV FSVLSIVNRV RQGYSPLSFQ TLLPATRGPD 720
  721 RPEGIEEEGG ERDRDRSGQL VNGFLALIWV DLRSLFLFSY HRLRDLLLTV TRIVELLGRR 780
  781 GWEILKYWWN LLQYWSQELK NSAVSLLNAT AIAVAEGTDR IIEVVQRVYR AILHIPTRIR 840
  841 QGLERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle