YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|665532
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.49
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKEKYQHL RRWGWRWGTM LLGMLMICSA TEKLWVTVYY GVPVWKEATT TLFCASDAKA  60
   61 YDTEVHNVWA THACVPTDPN PQEVVLVNVT ENFNMWKNDM VEQMHEDIIS LWDQSLKPCV 120
  121 KLTPLCVSLK CTDLKNDTNT NSSSGGMIME KGEIKNCSFN ISTSIRGKVQ KEYAFFYKHD 180
  181 IIPIDNDTTS YTLTSCNTSV ITQACPKVSF EPIPIHYCAP AGFAILKCNN KTFNGTGPCT 240
  241 NVSTVQCTHG IKPVVSTQLL LNGSLAEEEV VIRSANLTDN VKTIIVQLNQ SVEINCTRPN 300
  301 NNTRKRIRIQ RGPGRTFVTI GKIGNMRQAH CNISRAKWNN TLKQIASKLR EQYGNNKTII 360
  361 FKQSSGGDLE IVTHSFNCGG EFFYCNSTQL FNSTWFNSTW STEGSNNTEG SDTITLPCRI 420
  421 KQIINMWQEV GKAMYAPPIS GQIRCSSNIT GLLLTRDGGN NNNGSEIFRP GGGDMRDNWR 480
  481 SELYKYKVVK IEPLGVAPTK AKRRVVQREK RAVGIGALFL GFLGAAGSTM GAASMTLTVQ 540
  541 ARQLLSGIVQ QQNNLLRAIE AQQHLLQLTV WGIKQLQARI LAVERYLKDQ QLLGIWGCSG 600
  601 KLICTTAVPW NASWSNKSLE QIWNHTTWME WDREINNYTS LIHSLIEESQ NQQEKNEQEL 660
  661 LELDKWASLW NWFNITNWLW YIKIFIMIVG GLVGLRIVFA VLSIVNRVRQ GHSPLSFQTH 720
  721 LPTPGGPDRP EGIEEEGGER DRDRSIRLVN GSLALIWDDL RSLCLFSYHR LRDLLLIVTR 780
  781 IVELLGRRGW EALKYWWNLL QYWSQELKNS AVSLLNATAI AVAEGTDRVI EVVQGACRAI 840
  841 RHIPRRIRQG LERILL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle