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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60234, gi|7444475
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVREIQRNY QNWWRWGMML LGMLMTCSIA EDLWVTVYYG VPVWKEATTT LFCASDAKSY  60
   61 ETEVHNIWAT HACVPTDPNP QEIELENVTE GFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLNC TNVNGTAVNG TNAGSNRTNA ELKMEIGEVK NCSFNITPVG SDKRQEYATF 180
  181 YNLDLVQIDD SDNSSYRLIN CNTSVITQAC PKVTFDPIPI HYCAPAGFAI LKCNDKKFNG 240
  241 TEICKNVSTV QCTHGIKPVV STQLLLNGSL AEEEIMIRSE NLTDNTKNII VQLNETVTIN 300
  301 CTRPGNNTRR GIHFGPGQAL YTTGIVGDIR RAYCTINETE WDKTLQQVAV KLGSLLNKTK 360
  361 IIFNSSSGGD PEITTHSFNC RGEFFYCNTS KLFNSTWQNN GARLSNSTES TGSITLPCRI 420
  421 KQIINMWQKT GKAMYAPPIA GVINCLSNIT GLILTRDGGN SSDNSDNETL RPGGGDMRDN 480
  481 WISELYKYKV VRIEPLGVAP TKAKRRVVER EKRAIGLGAM FLGFLGAAGS TMGAASLTLT 540
  541 VQARQLLSGI VQQQNNLLRA IEAQQHLLQL TVWGIKQLQA RVLAVERYLQ DQRLLGMWGC 600
  601 SGKHICTTFV PWNSSWSNRS LDDIWNNMTW MQWEKEISNY TGIIYNLIEE SQIQQEKNEK 660
  661 ELLELDKWAS LWNWFSISKW LWYIRIFIIV VGGLIGLRII FAVLSLVNRV RQGYSPLSLQ 720
  721 TLLPTPRGPP DRPEGIEEEG GEQGRGRSIR LVNGFSALIW DDLRNLCLFS YHRLRDLLLI 780
  781 ATRIVELLGR RGWEALKYLW NLLQYWGQEL KNSAISLLNT TAIAVAECTD RVIEIGQRFG 840
  841 RAILHIPRRI RQGFERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle