YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|328429
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAKGTRKNY QHLWRWGTML LGMLMICSAA EQLWVTVYYG VPVWKEATTT LFCASDAKAY  60
   61 DTEVHNVWAT HACVPTDPNP QEVVLQNVTE NFNMWKNNTV EQMHEDIISL WDQSLKPCVK 120
  121 STPLCVTLNC TDLTNATYAN GSSEERGEIR NCSFNVTTII RNKIQKEYAL FYRLDIVPID 180
  181 KDNTSYTLIN CNTSVITQAC PKVSFEPIPI HYCAPAGFAI LKCNDKKFNG TGPCTNVSTV 240
  241 QCTHGIKPVV STQLLLNGSL AEGEVVIRSE NFTNNAKTII VQLNKSVEIN CTRPNNNTKK 300
  301 GIAIGPGRTL YAREKIIGDI RQAHCNISKA KWNDTLKQIV TKLKEQFRNK TIVFNQSSGG 360
  361 DPEIVMHSFN CGGEFFYCKT TQLFNSTWLF NSTWNDTERS DNNETIIIPC RIKQIINSGR 420
  421 K

Type	Start	End	Confidence
Signal Peptide	1	29	0.85
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	421	0.99