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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74662, gi|328162
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAREKERNC QNLWKWGIML LGMLMTCSAA EDLWVTVYYG VPIWKEATTT LFCASDAKAY  60
   61 KKEAHNIWAT HACVPTDPNP QEIELENVTE NFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLNC TDELRNSKGN GKVEEEEKRK NCSFNVRDKR EQVYALFYKL DIVPIDNNNR 180
  181 TNSTNYRLIN CDTSTITQAC PKISFEPIPI HFCAPAGFAI LKCRDKKFNG TGPCSNVSTV 240
  241 QCTHGIRPVV STQLLLNGSL AEEEIIIRSE NLTNNVKTII VQLNASIVIN CTRPYKYTRQ 300
  301 RTSIGLRQSL YTITGKKKKT GYIGQAHCKI SRAEWNKALQ QVATKLGNLL NKTTITFKPS 360
  361 SGGDPEITSH MLNCGGDFFY CNTSRLFNST WNQTNSTGFN NGTVTLPCRI KQIVNLWQRV 420
  421 GKAMYAPPIE GLIKCSSNIT GLLLTRDGGA NNSSHETIRP GGGDMRDNWR SELYKYKVVK 480
  481 IEPIGVAPTK ARRRVVEREK RAIGLGAVFL GFLGAAGSTM GAASVTLTVQ ARQLMSGIVH 540
  541 QQNNLLRAIE AQQHLLQLTV WGIKQLQARV LAVERYLRDQ QLLGIWGCSG RHICTTNVPW 600
  601 NSSWSNRSLD EIWQNMTWME WEREIDNYTG LIYSLIEESQ IQQEKNEKEL LELDKWASLW 660
  661 NWFSITKWLW YIKLFIMIVG GLIGLRIVFA VLSVVNRVRQ GYSPLSFQTL LPVPRGPDRP 720
  721 EEIEEEGGER GRDRSIRLVN GLFALFWDDL RNLCLFSYHR LRDSILIAAR IVELLGRRGW 780
  781 EALKYLWNLL QYWSQELRNS ASSLLDTIAI AVAERTDRVI EVVQRACRAI LNVPRRIRQG 840
  841 LERLLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle