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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|328447
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARGTRKNY QRLWRWGTML LGMLMICSAA ENLWVTVYYG VPVWKEATTT LFCASDARAY  60
   61 ATEVHNVWAT HACVPTDPNP QEVVLGNVTE NFDMWKNNMV EQMQEDIISL WDQSLKPCVK 120
  121 LTPLCVTLDC TDVNTTSSSL RNATNTTSSS WETMEKGELK NCSFNTTTSI RDKMQEQYAL 180
  181 FYKLDVLPID KNDTKFRLIH CNTSTITQAC PKISFEPIPM HYCTPAGFAI LKCNDKKFNG 240
  241 TGPCTNVSTV QCTHGIKPVV STQLLLNGSL AEEEVIIRSS NFTNNAKIII VQLNKSVEIN 300
  301 CTRPNNNTRN RISIGPGRAF HTTKQIIGDI RQAHCNLSRA TWEKTLEQIA TKLRKQFRNK 360
  361 TIAFDRSSGG DPEIVMHSFN CGGEFFYCNT SQLFNSTWND TTRANSTEVT ITLPCRIKQI 420
  421 VNMWQEVGKA MYAPPISGQI RCSSKITGLL LTRDGGKNTT NGIEIFRPAG GDMRDNWRSE 480
  481 LYKYKVVKIE PLGVAPTKAR RRVVQREKRA VGMLGAMFLG FLGAAGSTMG ARSMTLTVQA 540
  541 RQLLSGIVQQ QNNLLRAIEA QQHLLQLTVW GIKQLQARVL AVERYLKDQQ LLGIWGCSGK 600
  601 LICTTTVPWN ASWSNKSLNE IWDNMTWMQW EREIDNYTHL IYTLIEESQN QQEKNEQELL 660
  661 ELDKWAGLWS WFSITNWLWY IRIFIIIVGG LVGLRIVFAV LSIVNRVRQG YSPLSFQTRL 720
  721 PTQRGPDRPE GIEEEGGERD RDRSGRLVDG FLALIWDDLR SLCLFSYHRL RDLILIVARI 780
  781 VELLGRRGWE VLKYWWNLLQ YWSQELKNSV ISLLNATAIA VAEGTDRVIE IVQRAYRAFL 840
  841 NIPRRIRQGL ERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle