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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|328573
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVMEMRKNC QHLWKWGTML LGMLMICSAA EDLWVTVYYG VPVWKEATTT LFCASEAKAY  60
   61 KTEVHNVWAK HACVPTDPNP QEVLLENVTE NFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLNC TDANLNGTNV TSSSGGTMME NGEIKNCSFQ VTTSRRDKTQ KKYALFYKLD 180
  181 VVPIEKGNIS PKNNTSNNTS YGNYTLIHCN SSVITQACPK VSFEPIPIHY CTPAGFAILK 240
  241 CNDKKFNGTG PCKNVSTVQC THGIRPVVST QLLLNGSLAE EEVVIRSENF TDNVKTIIVQ 300
  301 LNASVQINCT RPNNNTRKSI TKGPGRVIYA TGQIIGDIRK AHCNLSRAQW NNTLKQVVTK 360
  361 LREQFDNKTI VFTSSSGGDP EIVLHSFNCG GEFFYCNTTQ LFNSTWNSTE GSNNTGGNDT 420
  421 ITLPCRIKQI VNMWQEVGKA MYAPPISGQI KCISNITGLL LTRDGGEDTT NTTEIFRLGG 480
  481 GNMRDNWRSE LYKYKVVRIE PLGVAPTRAK RRVVQREKRA VGTIGAMFLG FLGAAGSTMG 540
  541 AGSITLTVQA RHLLSGIVQQ QNNLLRAIEA QQHLLQLTVW GIKQLQARVL AVERYLRDQQ 600
  601 LLGIWGCSGK LICTTTVPWN ASWSNKSLNM IWNNMTWMQW EREIDNYTGI IYNLLEESQN 660
  661 QQEKNEQELL ELDKWANLWN WFDITQWLWY IRIFIMIVGG LVGLKIVFAV LSIVNRVRQG 720
  721 YSPLSFQTHL PAPRGPDRPE GIEGEGGERD RDRSGGAVNG FLTLIWDDLW TLCSFSYHRL 780
  781 RDLLLIVVRI VELLGRRGWE ALKYWWNLLQ YWSQELKNSA VSLLNTTAIA VAEGTDRIIE 840
  841 VAQRILRAFL HIPRRIRQGL ERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle