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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|328676
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKGIRKNY QHLWRGGTLL LGMLMICSAV EKLWVTVYYG VPVWKEATTT LFCASDAKAY  60
   61 DTEVHNVWAT HACVPTDPNP QEIVLENVTE NFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLHC TNLKNATNTK SSNWKEMDRG EIKNCSFKVT TSIRNKMQKE YALFYKLDVV 180
  181 PIDNDNTSYK LINCNTSVIT QACPKVSFEP IPIHYCAPAG FAILKCNDKK FNGSGPCTNV 240
  241 STVQCTHGIR PVVSTQLLLN GSLAEEGVVI RSENFTDNAK TIIVQLKESV EINCTRPNNN 300
  301 TRKSITIGPG RAFYATGDII GDIRQAHCNI SGEKWNNTLK QIVTKLQAQF GNKTIVFKQS 360
  361 SGGDPEIVMH SFNCGGEFFY CNSTQLFNST WNNTIGPNNT NGTITLPCRI KQIINRWQEV 420
  421 GKAMYAPPIR GQIRCSSNIT GLLLTRDGGK EISNTTEIFR PGGGDMRDNW RSELYKYKVV 480
  481 KIEPLGVAPT KAKRRVVQRE KRAVTLGAMF LGFLGAAGST MGARSLTLTV QARQLLSGIV 540
  541 QQQNNLLRAI EAQQHLLQLT VWGIKQLQAR VLAVERYLKD QQLLGIWGCS GKLICTTAVP 600
  601 WNASWSNKSL DQIWNNMTWM EWEREIDNYT NLIYTLIEES QNQQEKNEQE LLELDKWASL 660
  661 WNWFDISKWL WYIKIFIMIV GGLVGLRIVF TVLSIVNRVR QGYSPLSFQT RFPAPRGPDR 720
  721 PEGIEEEGGE RDRDRSSPLV HGLLALIWDD LRSLCLFSYH RLRDLILIAA RIVELLGRRG 780
  781 WEALKYWGNL LQYWIQELKN SAVSLFDAIA IAVAEGTDRI IEVAQRIGRA FLHIPRRIRQ 840
  841 GFERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle