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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33359204
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARETRKNY QCLWRWGTML LGMLMICSAA ENLWVTVYYG VPVWKDATTT LFCASDAKAY  60
   61 DTEVHNVWAT HACVPTDPNP QEVVLGNVTE NFNMWKNNMV DQMHEDIVSL WDQSLKPCVK 120
  121 LTPLCVTLNC TDYLGNATNT NNSSGGTVEK EEIKNCSFNI TTGIRDKVQK AYAYFYKLDV 180
  181 VPIDDDNTNT SYRLIHCNSS VITQTCPKVS FEPIPIHYCA PAGFAILKCN NKKFSGKGQC 240
  241 TNVSTVQCTH GIKPVVSTQL LLNGSLAEEE VVIRSDNFTN NAKTILVQLN VSVEINCTRP 300
  301 NNNRRRRITS GPGKVLYTTG EIIGDIRKAY CNISRAKWNK TLEQVATKLR EQFGNKTIVF 360
  361 KQSSGGDPEI VMHSFNCRGE FFYCNTTKLF NSTWNENSTW NATGNDTITL PCRIKQIINM 420
  421 WQEVGKAMYA PPIEGQIRCS SNITGLLLTR DGGGDKNSTT EIFRPAGGNM KDNWRSELYK 480
  481 YKVVKIEPLG VAPTKAKRRV VQREKRAVGV IGAMFLGFLG AAGSTMGAAS ITLTVQARKL 540
  541 LSGIVQQQNN LLRAIEAQQH LLQLTVWGIK QLQARVLAVE RYLRDQQLLG IWGCSGKLIC 600
  601 TTTVPWNTSW SNKSLDKIWN NMTWMEWERE IDNYTSLIYT LLEESQNQQE KNEQELLELD 660
  661 KWASLWNWFS ITNWLWYIRI FIMIVGGLIG LRIIFAVLSI VNRVRQGYSP LSFQTLIPAQ 720
  721 RGPDRPEGIE EGGGERDRDR STRLVNGFLA LFWDDLRSLC LFSYHRLTDL LLIVARIVEL 780
  781 LGRRGWEVLK YWWNLLLYWS QELKNSAVSL LNATAIAVAE GTDRVIEVVQ RVGRAILHIP 840
  841 TRIRQGFERA LL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle