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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74658
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKGIRRNC QHLWIWGTML FGMWMICSAV EQLWVTVYYG VPVWKEATTT LFCASDAKAY  60
   61 STEAHKVWAT HACVPTNPNP QEVVLENVTE NFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLNC IDKNITDWEN KTIIGGGEVK NCSFNITTSI RDKVHKEYAL FYKLDVVPIK 180
  181 SNNDSSTYTR YRLIHCNTSV ITQACSKVSF EPIPIHYCAP AGFAILKCND KKFNGTGPCT 240
  241 NVSTVQCTHG IRPVVSTQLL LNGSLAEEEI VIRSENFTDN AKTIIVHLNE SVEINCTRPN 300
  301 NNVRRRHIHI GPGRAFYTGE IRGNIRQAHC NISRAKWNNT LKQIVEKLRE QFKNKTIVFN 360
  361 HSSGGDPEIV THSFNCGGEF FYCDSTQLFN STWNVTGIST EGNNNTEENG DTITLPCRIK 420
  421 QIINMWQGVG KAMYAPPIGG QIRCSSNITG LLLTRDGGNS SSREEIFRPG GGNMRDNWRS 480
  481 ELYKYKVVKI EPLGVAPTKA KRRVVQREKR AVGAIGAMFL GFLGAAGSTM GAASLTLTVQ 540
  541 ARQLLSGIVQ QQNNLLRAIE AQQHLLQLTV WGIKQLQARV LAVERYLRDQ QLLGIWGCSG 600
  601 KLICTTTVPW NASWSNKSMD QIWNNMTWME WEREIDNYTS LIYNLIEESQ NQQEKNEQEL 660
  661 LELDKWASLW NWFSITNWLW YIKIFIMIVG GLVGLRIVFS VLSIVNRVRQ GYSPLSFQTH 720
  721 LPTPRGPDRP EGTEEEGGER DRDRSVRLVH GFLALIWDDL RSLCLFSYHR LRDLLLIVTR 780
  781 IVELLGRRGW EALKYWWNLL QYWSKELKNS AVGLLNAIAI AVAEGTDRVI EVVQRICRAI 840
  841 IHIPRRIRQG LERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle