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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|329362
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKGIMRNC QHLWIWGTML FGMWMICSAV EQLWVTVYYG VPVWKEATTT LFCASDAKAY  60
   61 STEAHNVWAT HACVPTDPNP QEVILGNVTE NFNMWKNNMV EQMHEDIISL WDQSLKPCVK 120
  121 LTPLCVTLNC IDKNITDWKN TTIIGGGEVK NCSFNITTSR RDKVHKEYAL FYKLDVVPIK 180
  181 GDNNSSRYRL INCNTSVITQ ACPKVSFEPI PIHYCAPAGF AILKCNDKKF NGTGPCTNVS 240
  241 TVQCTHGIRP VVSTQLLLNG SLAEEEIVIR SENFTDNAKT IIVHLNESVE INCTRPYNNV 300
  301 RRSLSIGPGR AFRTREIIGI IRQAHCNISR AKWNNTLKQI VEKLREQFKN KTIVFNHSSG 360
  361 GDPEIVTHSF NCGGEFFYCN STQLFNSTWN GTDIKGDNKN STLITLPCRI KQIINMWQGV 420
  421 GKAMYAPPIQ GQIRCSSNIT GLLLTRDGGN SSSREEIFRP GGGNMRDNWR SELYKYKVVR 480
  481 IEPLGVAPTK AKRRVVQREK RAVGTIGAMF LGFLGAAGST MGAGSLTLTV QARQLLSGIV 540
  541 QQQNNLLRAI DAQQHLLQLT VWGIKQLQAR VLAVERYLRD QQLLGIWGCS GKLICTTTVP 600
  601 WNASWSNKSM NQIWDNLTWM EWEREIDNYT SIIYSLIEES QNQQGKNEQE LLELDKWASL 660
  661 WNWFDITNWL WYIKIFIMIV GGLIGLRIVF TVLSIVNRVR QGYSPLSFQT HLPTPRGPDR 720
  721 PEGIEEEGGE RDRDRSVRLV HGFLALIWDD LRSLCLFSYH RLRDLLLIVK RIVELLGRRG 780
  781 WEALKYWWNL LQYWSKELKN SAVGLLNAIA IAVAEGTDRV IEVVQRICRA IIHIPRRIRQ 840
  841 GLERALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle