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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|327823
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVMGIRMNY QHLWKWGIML LGILMTCSVA EDLWVTVYYG VPVWKEATTT LFCASDAKSY  60
   61 EPEAHNIWAT HACVPTDPNP REIEMENVTE NFNMWKNNMV EQMHEDIISL WDQNLKPCVK 120
  121 LTPLCVTLNC TNAGGNKTTN GNNTTNQEEQ MMEKGEMKNC SFNITTVISD KKKQVHALFY 180
  181 RLDVVPIDDD NSANTSNTNY TNYRLINCNT SAITQACPKV TFEPIPIHYC APAGFAILKC 240
  241 KDKKFNGTGP CKKVSTVQCT HGIRPVVSTQ LLLNGSLAEE EIIIRSENLT NNVKTIIVHL 300
  301 NESVEINCTR PDNKITRQST PIGLGQALYT TRIKGDIRQA YCNISAAAWN KTLQQVAKKL 360
  361 GDLLNQTTII FKPPAGGDPE ITTHSFNCGG EFFYCNTSRL FNSTWNSSTW NNDTLNSEGT 420
  421 IKLPCRIKQI INMWQGVGKA MYAPPIEGLI KCTSNITGLL LTRDGGVNNS TNETFRPGGG 480
  481 DMKDNWRNEL YKYKVVRIEP LGIAPTRAKR RVVEREKRAI GLGAVFLGFL GAAGSTMGAV 540
  541 SVALTGQARQ LLSGIVQQQN NLLRAIEAQQ HMLQLTVWGI KQLQARVLAV ESYLKDQQLL 600
  601 GIWGCSGKHI CTTTVPWNSS WSNKSLEEIW NNMTWIEWER EIDNYTGVIY SLIENSQIQQ 660
  661 EKNEQDLLQL DKWASLWNWF SITKWLWYIK IFIMIVGGLI GLRIVFTVLS LVNRVRQGYS 720
  721 PLSFQTLLPA PRGPDRPEGI EEEGGEQGRD RSIRLVNGFS ALFWDDLRNL CLFSYHRLRD 780
  781 LILIATRIVE LLGRRGWEAI KYLWSLLQYW TQELKNSFIS LLNATAIAVA EGTDRIIELI 840
  841 RRAFRAVLHI PRRVRQGLER ALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle