YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERG3_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVVLEVTDQ FMFDYMYAWL LPARPALYDF PDKTNGTAQA FSSWVYEPAT KFFSLEPSQA  60
   61 AYQSIWTRDN IYRQALSLFL ILWLFGLVTY YVFASLSYIF VFDKKTMEHP KFLKNQVWLE 120
  121 IKQTNAALPV MAFFTFPFLV AEVRGYSLLY DTTAEGPGRW YDFFQFPLFI MFTDFGIYWI 180
  181 HRGLHHPLVY KHLHKPHHKW IMPTPYASHA FHPIDGFAQS IPYHIFPFIF PLQKMAYVGL 240
  241 FVFINFWTIM IHDGEYYANN PVINGAACHS VHHFAFNYNY GQFTTLWDRL GGSYREPDGD 300
  301 MFAKEKKMST TTWKKQVNEM EKIVKEVEGE DDRLYEPTET KKSK

Type	Start	End	Confidence
Cytoplasmic	1	74	0.74
Transmembrane Helix	75	100	0.80
Non-Cytoplasmic	101	125	0.70
Transmembrane Helix	126	146	0.80
Cytoplasmic	147	159	0.60
Transmembrane Helix	160	181	0.86
Non-Cytoplasmic	182	229	0.63
Transmembrane Helix	230	249	0.77
Cytoplasmic	250	344	0.78