YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ETR2_PELHO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFNMHS KTVEIVMTTA KIMTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LQLSYTLRQQ NPVGFTVPIH LPVINQVFSS NHAIKISPNS PIARLRPIAG 240
  241 KYMPGEVVGV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNVAL DMARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETVLKSSN LLATLINDVL DLSRLEDGSL QLDIGTFNLH 420
  421 ALLREVHNLI KPIASVKKLC ISLNVATDLP EYAVGDEKRL VQIILNVVGN AVKFSKEGNI 480
  481 SITAFVAKSE SLRDPRAPDF FPICGENQFY LRVQVKDSGL GINPQDIPRL FTKFAQTQPV 540
  541 ATKNSGGSGL GLAICKRFVN LMEGHIWIDS EGPGKGCTAT FVVKLGIPER SSEPKLLLMP 600
  601 KVPANHGQTN FSGLKVLLLD DNGVSRAVTR GLLAHLGCDV TTVSSSDELL RVVSQDYKVV 660
  661 FMDVCMPEVD GFEIAVRIHE KFMTRHERPL IVALTGNIDQ VTKDNCTRVG MEGVVLKPVS 720
  721 IDKMRNVLSN LLEHRVLFEA I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle