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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FA5_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLACPGFWV LVVLGSSWAG WGNLGAEAAK LRQFYVAAQS IRWNYRPEST HLSSKPFETS  60
   61 FKKIVYREYE AYFQKEKPQS RTSGLLGPTL YAEVGDIMKV HFKNKAHKPL SIHAQGIKYS 120
  121 KFSEGASYSD HTLPMEKMDD AVAPGQEYTY EWIISEHSGP THDDPPCLTH IYYSYVNLVE 180
  181 DFNSGLIGPL LICKKGTLTE DGTQKMFEKQ HVLMFAVFDE SKSWNQTSSL MYTVNGYVNG 240
  241 TMPDITVCAH DHISWHLIGM SSGPELFSIH FNGQVLEQNH HKISAITLVS ATSTTANMTV 300
  301 SPEGRWTIAS LIPRHFQAGM QAYIDIKNCA KKTRNPKKLT RDQRRHIKRW EYFIAAEEVI 360
  361 WDYAPIIPAN MDKKYRSLHL DNFSNRIGKH YKKVVYKQYQ DDSFTKRLED PSSEGDGILG 420
  421 PIIRAQVRDT LKIVFKNMAS RSYSIYPHGV TFSPYDNEVN SSSTSGSNTM IRAVRPGETY 480
  481 TYKWNILESD EPTENDAQCL TRPYYSNVDI TRDLASGLIG LLLICKSRSL DRRGIQRAAD 540
  541 IEQQAVFAVF DENKSWYIED NIYKFCENPE KVKRDDPKFY ESNIMSNFTL PAINGYVPES 600
  601 IPILGFCFDD TVQWHFCSVG TQNDILTIHF TGHSFIYGKR HEDTLTLFPM QGESVTVTMD 660
  661 NVGTWMLTTM NSNPRSKKLR LRFRDAKCIR NDDDDSYEII YEPSGSTAMT TKKIHDSSEI 720
  721 EDENDADSDY QDELALILGL RSFRNSSLNQ EKDELNLTAL ALEKDSEFIP PSANRSLDSN 780
  781 SSSRSHVSRL IAKNFAESLK TLLHLEAPAA GSPLEHAGLD KNSALNPPMA EHSSPYSEDP 840
  841 REDHPLSDVT GVSLLPFGTG FKNRKPAKHQ RFQVGRGQAA KHKFSQTRFP AHKTRTRLSQ 900
  901 DNSSSSRMGP WEDIPSDLLL LQQKDPYKIL NGEWHLVSEK GSYEIIQDAN ENKTVNKLPN 960
  961 SPQNDSRTWG ENIPFKNSHG KQSGHPTFLV TRRKPLQDRQ DRRNSRLKEG LPLIRTRRKK1020
 1021 KEEKPAYHVP LSPRSFHPLR GEVNASFSDR RHNHSLLLHA SNETSLSIDL NQTFPSMNLS1080
 1081 LAASLPDHDQ TSPNDTTSQT SSPPDLYPTV SPEEHYQIFP IQDSDPTHST TAPSNRSPDP1140
 1141 THSTTAPSNR SPPTQPSQIP NYDLRNRAIP TDVSQIFPSL ELEVWQTATS LDLSQPSISP1200
 1201 DLGQMALSPD PGQESLSPDL GQTSLSPDLS QESLSPDLGQ TALSPDPSQE SLSPDLGQTA1260
 1261 LSPDPSQESL SPDLGQTALS PDPGQESLSP DLGQTSLSPD LSQESLSPDL GQTALSPDPS1320
 1321 QESLSPDLGQ TALSPDPSQE SLSPDLGQTS LSPDLGQESL SPDLGQTALS PDPSQESLSP1380
 1381 DLGQTSLSPD LGQESLSPDL GQTALSPDLS QESLSPDLGQ TPLSPDLSLE SLSPDLSQLD1440
 1441 LKQTSPPLDL NQTSHTSESS QSLPLPEFGQ TFPNADIGQM PSPPPDSTLN NTFIPEEFNP1500
 1501 LVVVGLSRDD GDYIEIIPRQ KEESSEEDYG EFEFVAYNDP YQTDLRTDIN SSRNPDNIAA1560
 1561 WYLRSNTGNR KYYYIAAEEI SWDYSKFVQS DDVDYVPEDT VYKKVVFRKY LDSTFTKLDP1620
 1621 QGEYEEHLGI LGPVIRAEVD DVIQVRFKNL ASRPYSLHAH GLSYEKSSEG KTYEDDSPEW1680
 1681 FKEDNAIQPN KTYTYVWHAT TRSGPENPGS ACRAWAYYSA VNPEKDIHSG LIGPLLICRK1740
 1741 GTLDKETNMP VDMREFVLLF MVFDEKKSWY YDKKPTRSWR RASSEVKNSH EFHAINGMIY1800
 1801 NLPGLRMYEQ EWVRLHLLNL GGSRDIHVVH FHGQTLLENG TQQHQLGVWP LLPGSFKTLE1860
 1861 MKASKPGWWL LDTEVGEIQR AGMQTPFLIV DRECKMPMGL STGLIADSQI QASEFWGYWE1920
 1921 PKLARLNNGG SYNAWIAEKL STEFNPEPWI QVDMQKEVLL TGIQTQGAKH YLKPYYTTEF1980
 1981 CVAYSLDRKN WRIFKGNSTR NVMYFGGNSD ASTIKENQID PPVVARYIRI SPTGSYNKPA2040
 2041 LRLELQGCEV NGCSTPLGME SGKIENKQIT ASSFKKSWWG NYWEPFLARL NAQGRVNAWQ2100
 2101 AKANNNNQWL QIDLLKIKKI TAIVTQGCKS LSSEMYVKSY TIHYSDQGTD WKPYREKSSM2160
 2161 VDKIFEGNNN VRGHVKNFFN PPIISRFIRI IPKTWNQSIA LRLELFGCDM Y

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