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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG34380-PC, FBpp...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHTSPSEAT FSSNISMFSR QCLSHLTRSP PTTTPTAAAP RPPCRAPRWT LCLWTLVIAS  60
   61 GCLMLNAPTT MAFDIATCNV PLGMESLLIT DAQITASSAH DMAFVGPQHA RLKTDNDGGA 120
  121 WCPKHMVSNA LKEYLQVDLL QTHVITAIRT QGRYGKGQGQ EYTEAYVLEY WRPGFDKWQR 180
  181 WKNIQGKEIL PGNINTYSEV ENALQPIIFA SKIRIYPYGQ YDRTVCLRAE IVGCPWEEGI 240
  241 VSYSIPKGVQ RGMEVDLSDK TYDGNEQGDR YVDGLGQLVD GQKGKDNFRT DIHGFGKGYE 300
  301 WIGWRNDTPG LLGKPVEIVF EFDTVRNFSA IVLHTNNMFT KDVQVFVHAK VFFSIGGRYF 360
  361 SGEPVQFSYM PDTIMDHARD VTIKLHHRVG KYLKINLYFA VKWIMLSEIS FISVPAMGNF 420
  421 TDEQEQRSNS PSQAQDVHDE TNGSEYQANR NKPNGVGGSA GGLGEGVAAA GGDIVGNNKY 480
  481 NNGPQLIAPR PIDQEPNDAN FIGVVIVVLT TIIILLVAII LFIVSRTKRA RGSNVLDAFQ 540
  541 YSFNPNTLGG NVDKHRPNGN SIKANVDDND SIGKNSLYHE PFNVNMYTCG VNGYAAVNDL 600
  601 QCNMTPDYTD VPEGGYAVPH MQDYMPSSKM GGGAPGGGGY VNVRRTPPPP LSSIFPRPPT 660
  661 VPPPPMEKYY ATTAIFKPLK GPGSERSGCS SNTNTVSSGG GKSSHSHSSH CSTGGPDHSG 720
  721 IYDDGIGTMN SKATAPMINP YSSGNSSSAA AAAAAEFQRA RTYNFRSYPD NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle