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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GP10_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFILLVFL FLLVSNSLGK SNKKDDQSPE IVKINSNDHL PLYYEIIISG HFSIDKTGLT  60
   61 VTYLGDKIHD FEFIKGQVLN VTGEPQNNPI PTVSINPDQL NDDRFEVSDS SDFSKQTPTP 120
  121 TPTPTSKPTS TPTSTPSQTI PPTVSPTVPP QTTSPTSKPT STPTPTSTPT PTSTPTPTSQ 180
  181 TIPPPTTTPK PTKSSKPTKT PVPTPTPTRP SSSVSKGYDI IKFNITDIED IEMGKITISY 240
  241 KNGQSSSKHF QPNSIIKSIE RTNSVGGVVE FKGSFFYTDD YEPSIKIGNK ICETLTSSQT 300
  301 SIRCYLTNGT GCGYTITIDN LLNPIDNNGN SNLTYCYANP IIDKVIGYKD KKLTLITIIG 360
  361 KNFLNNATVI IEKPNGNKRN CSNVLLSTDT LFICELSKSY HTLSSPKTTN TTMLSFINNS 420
  421 PNSTVSNEII EMISGYFQIK ISTKPSTTDD DNNKNNDDGD SEIDSVGKSA VDSSKSNNNS 480
  481 GGGGNKKLYL LIILPTVLFI IVAALVAIFI KTRVSQNSGS KVNKNNNKKD SINVPFQMLD 540
  541 EITT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle