YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1170309, gi\|4...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNVSALRAA TPSIASVSSV ASPSEQHGLS TSVGVGVNDT TSRTGDGGAA SSASSASAAP  60
   61 QQQSQSALHN KLEAKWDTLL PTDTNLQCST WPDSIPLLAG YSATPTFSFD PCTYGSYDPS 120
  121 AYFASNGIAG SMYTLPDQFP RSENDMLDNS NTSNGNKSDK DGIKLEDEDE ILEDEENDEE 180
  181 DDGTGKRKKR KRRVLFTKAQ TYELERRFRS QKYLSAPERE ALAMQIRLTP TQVKIWFQNH 240
  241 RYKTKKSHTD KPINAALLTT MPNAFSSQST AASFPTRAMP IPMLVRDSSA RSSDISSTSP 300
  301 YTVAFGSANS GYLPTPSAYL PATSGYFSNG PSAASSYMTN TQWWPS

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	346	0.99