YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_OCEIH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLILMGLPG AGKGTQAAKI NEKYNIPHIS TGDMFRLAIK EGTELGKKAK EFMDQGDLVP  60
   61 DEVTVGIVKE RLAMDDCANG FLLDGFPRTT RQAEELQNLL SDLGKSIDYV IHVDVPEEKL 120
  121 VERLTGRRIC PTCGTAYHVV YNPPKEEGIC DKDGSQLIQR DDDQPETVKN RLAVNIEQTQ 180
  181 PLLDFYQDKG YLVKVNGDRD INVVFQDIES ILEKK

Type	Start	End	Confidence
Signal Peptide	1	17	0.71
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	215	0.99