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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYAM2_HORSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIASQFLSAL TLVLLIKESG AWSYSASTTN MTFDEASAYC QQRYTHLVAI QNQEEIKYLN  60
   61 SIFNHSPSYY WIGIRKVNDK WVWIGTQKPL TEEAKNWAPG EPNNKQNEDC VEIYIKRYKD 120
  121 AGKWNDENCN KKKLALCYTA ACTHTSCSGH GECVETINNY TCQCHPGFTG LRCEQVVTCQ 180
  181 AQEAPEHGRL VCTHPLGNFS YNSSCSVSCE EGYLPSRTEA MQCTSSGEWS APPPACHVVE 240
  241 CDALTNPANG VMQCSQSPGS FPWNTTCTFD CQEGFELTGP QHLQCTPSGN WDNEKPTCKA 300
  301 VTCGAGGHPQ NGFVNCSHSS AGEFTFNSSC NFTCEEGFVL QGPAQVECTA QGQWTQQVPV 360
  361 CKALQCKALS RPERGYMSCR PSTSGSFQSG SSCEFSCEQG FVLKGSKKLR CGPTGEWDSE 420
  421 KPTCEAVRCD AVRQPQGGLV RCTHSAAGEF TYKSSCAFSC EEGFELRGSA QLECTLQGQW 480
  481 TQEVPSCQVV QCASLAVPGK VSMSCSGEPV FGAVCTFACP EGWTLNGSAA LTCGATGHWS 540
  541 GMLPTCEATA KSNIPLTVGL SAAGTSLLTL ASFLFWLLKR LRRKAKKFVP ASSYQSLQSD 600
  601 GSYQMPSESA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle