YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|168823083, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKFKTFAA VGALIGSLAL AGCGQDEKDP NHIKVGVIVG AEQQVAEVAQ KVAKEKYGLD  60
   61 VELVTFNDYV LPNEALSKGD IDANAFQHKP YLDQQIKDRG YKLVSVGKTF VYPIAGYSKK 120
  121 IKSLDELKDG SQVAVPNDPT NLGRSLLLLQ KVGLIKLKDG VGLLPTSLDI VENPKNLKIV 180
  181 ELEAPQLPRS LDDAQIALAV INTTYASQIG LTPAKDGIFV EDKDSPYVNL IVTREDNKDA 240
  241 ENVKKFVQAY QSDEVYEAAN KVFNGGAVKG W

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	271	0.99